This is page devoted to bioinformatics teams associated with Interdisciplinary Centre for Mathematical and Computational Modelling, University of Warsaw.

Advanced search functionality including project wide search and replace. Integrated Python debugger including support to debug multi-threaded and multi-processing applications.

SpliProt3D is an online database of representative experimentally determined and computationally predicted structures of proteins of the human spliceosome. RNA Bricks is a database of RNA 3D structure motifs and their contacts, both with themselves and with proteins. The database provides structure-quality score annotations and tools for the RNA 3D structure search and comparison. We developed a method for 3D homology modeling of RNA structures. It requires a pairwise sequence alignment and a structu.

Are two complementary resources whichpresent RNA metabolism at different levels. While MODOMICS presents RNA modification pathways on the level of nucleosides, RNApathwaysDB deals with RNA metabolism with respect to whole RNA molecules. Our ultimate goal is to integrate these databases, however at the moment the users are invited to consult both of these complementary resources, depending on their needs and interests.

The course is organized by the scientists from the Faculty of Biology. The workshop comprises a wide scope of themes and techniques of modern computational biology and system biology. The Summer School is an introduction to bioinformatics and we invite to participate all those, who would like to gain basic knowledge in this field. In this year our special guest will be a team from the European Bioinformatics Institute preparing EBI Training - Bioinformatics Roadshow.

A database of DNA repair pathways. REPAIRtoire contains components involved in the repair mechanisms of all kinds of cellular DNA lesions. In this version, repair pathways from H. Are contained, together with their protein components and molecular events that trigger those pathways. Lesiak J, Osinska E, Rother K, Bujnicki JM.

The hub for Rosetta modeling software. Close collaboration between the labs the norm, even within single code modules. This allows for rapid enhancements and promotes the values of team science. A dynamic and evolving macromolecular modeling suite addressing biomolecular structure prediction and design. RosettaCommons members enable notable scientific advanced in computational biology. Design of a novel protein fold. High affinity redesign of protein-protein interfaces.

In the center cover a range of expertises including computational biology, RNA bioinformatics, molecular models in diabetes, RNA biology, animal models, functional genomics and high-throughput sequence analysis. We are always looking for motivated and talented young scientists as well as projects or colaborations within the areas of the center. Us with suggestions or to ask for more information.